Plant GARDEN How To ▶︎

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Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933504.1_cds_XP_016479764.1_71272

CDS Infomation

[gene=LOC107801015] [db_xref=GeneID:107801015] [protein=clathrin heavy chain 1-like] [partial=3'] [protein_id=XP_016479764.1] [location=join(25397..25441,25615..25819,27194..27282,27390..27468,27629..27756,28353..28451,28541..28649,28774..28853,28954..29181,29295..29360,29733..29849,29976..30173,30295..30411,30549..30608,30922..31008,31176..31259,31333..31467,31542..31604,31683..31787,33187..33299,33407..33659,33742..33878,33985..34263,34350..35352,35500..>35532)] [gbkey=CDS]

Sequence

ATGGCGGCTGCTAATGCTCCGATCACTATGAAAGAGGCCCTTACATTGTCAAGTGTAGGG
GTGAACCCGCAGTTCATCACATTCACAAATGTTACCATGGAATCAGACAAGTATATATGT
GTTCGAGAGACGGCACCACAAAATAGTGTGGTGATTGTTGATATGAATATGCCAATGCAG
CCTTTGCGCCGCCCTATTACTGCTGACTCTGCTCTTATGAATCCCAATTCCAGAATTTTG
GCTCTAAAAGCTCAAGTACCAGGAACTACTCAAGATCACTTACAAATTTTTAATATTGAC
GCAAAGCAGAAAATGAAGTCACATCAGATGCCCGAGCAGGTTGTTTTCTGGAAGTGGATT
ACTCCGAAGATTTTAGGAATTGTCACACAAACCTCAGTCTATCATTGGCCAATTGAAGGT
GATACTGAGCCTGTAAAGATGTTTGATAGAACAGCCAACCTAGCCAATAACCAAATAATC
AATTATCGTTGTGATCCTTCAGAGAAATGGTTGGTTTTGATTGGTATTGCCCCAGGTTCA
CCGGAGAGGCCCCAACTGGTCAAAGGAAATATGCAACTATTTTCAGTTGATCAGCAACGG
AGTCAATCCCTCGAGGCGCACGCTGCATCATTTGCATCATTCAGAGTACCTGGAAGTGAT
AGGGATTCCATACTCATTTCTTTTGCCACGAGAAGCTTGAATGCTGGACAGGTTGTATCA
AAGTTGCATGTCATTGAGCTGGGAGCCCAGCCAGGGAAACCCTCATTTACAAAAAAACAG
GCCGATCTTTTCTTCCCTCCAGATTTTGCTGATGATTTCCCAGTTGCCATGCAGATATCT
CATAAGTATAGTTTAATTTTTGTCATCACAAAGCTTGGGCTTCTTTTTGTCTATGACCTG
GAAACAGCTACTGCAGTTTACAGAAATAGGATTAGCCCAGACCCTATTTTCCTGACAGCT
GAAGCTTCGTCAGTTGGTGGGTTTTATGCCGTCAACAGGCGAGGCCAAGTGTTGCTAGCC
ACAGTAAATGAAACTACTATTATACCTTTTATCAGTGGCCAATTGAACAATCTGGAGCTT
GCTGTCAATCTTGCTAAAAGAGGAAACCTTCCAGGTGCTGAGAATTTGGTCGTCCAGCGC
TTTCAAGAGTTGTTTGCTCAAACCAAGTACAAAGAGGCTGCTGAGCTTGCTGCTGAATCA
CCTCAGGGCATACTCAGGACGCCTGATACTGTTGCCAAATTTCAGAGTGTTCCTGTTCAA
CCAGGGCAAACACCTCCTCTTTTGCAGTACTTTGGGACACTTTTGACAAAAGGGAAGCTC
AATGCTTTTGAGTCATTAGAATTGTCACGCCTTGTTGTCAACCAAAATAAGAAGAACCTT
TTGGAGAACTGGTTAGCTGAGGATAAGTTGGAGTGCAGTGAGGATCTTGGTGACCTTGTG
AAGACTGTTGATAATGACCTTGCCTTGAAGATATACATCAAAGCAAGAGCAACTCCAAAA
GTTGTCGCTGCTTTTGCGGAGCGCAGGGAGTTTGACAAGATTCTGATATATTCCAAACAG
GTTGGATATACACCTGATTATCTGTTCCTCCTGCAAACAATTCTTCGATCTGATCCTCAG
GGAGCTGTTAACTTTGCACTCATGATGTCCCAAATGGAGGGAGGTTGTCCAGTTGATTAT
AATACAATCACTGACCTTTTTCTCCAGAGGAACTTGATCCGCGAGGCAACAGCATTTTTG
TTGGATGTTCTGAAACCTAACCTTCCAGAACATGGTTTTTTGCAGACTAAGGTATTGGAA
ATCAATCTTGTGACTTTCCCCAATGTAGCAGATGCTATATTAGCAAATGGAATGTTCAGT
CACTATGATCGACCTCGAATTGCTCAACTTTGTGAAAAAGCTGGTCTTTACGTGCGGGCT
CTGCAGCACTATTCTGAGCTCCCTGATATCAAGCGTGTCATTGTGAACACACATGCGATT
GAGCCTCAGGCTCTGGTTGAGTTCTTTGGGACTCTTTCGCGTGAATGGGCTCTTGAGTGC
ATGAAAGACCTCCTAGTGATCAATATCAAAGGCAACCTTCAAATAATTGTTCAGGTTGCA
AAAGAGTATTGGGAGCAATTGCGTGTTGATGCCTGCATAAAGCTTTTTGAGCAATTCAAG
TCTTATGATGGGTTGTACTTCTTCTTGGGATCATATTTGAGTTCCAGTGAGGATCCTGAT
ATTCACTTCAAATATATTGAGGCAGCTGCCAGGACTGGACAAATCAAGGAGGTTGAGCGC
GTCACAAGAGAATCAAACTTCTATGACCCTGAAAAGACGAAGAACTTCTTGATGGAAGCC
AAACTTCCCGATGCTCGGCCTCTTATTAATGTTTGTGACCGCTTTGGTTTTGTTCCTGAT
CTCACACACTACCTCTATACCAACAATATGCTACGGTACATTGAAGGTTATGTCCAAAAG
GTCAACCCAGGAAATGCTCCTTTAGTTGTGGGACAGTTATTGGATGATGAGTGTCCTGAA
GATTTTATTAAAGGCTTGATCCTTTCCGTTCGTTCTCTGCTTCCTGTTGAGCCCCTTGTG
GATGAATGTGAAAAGAGGAACCGCCTCCGACTGCTTACTCAGTTTTTGGAGCATCTTGTG
AGTGAAGGAAGCCAAGATGTGCATGTACACAATGCTCTGGGTAAGATCATCATAGATAGC
AACAATAACCCGGAGCACTTCCTGACGACCAATCCATATTATGATTCACGTGTTGTGGGT
AAATATTGTGAGAAGCGCGATCCTACCCTTGCTGTTGTTGCATATCGGAGAGGGAACTGT
GATGATGAACTTATCAATGTAACAAACAAGAACTCTTTGTTCAAACTGCAAGCCAGGTAT
GTCGTTGAGAGAATGGATGCTGACCTTTGGGAGAAGGTTCTTAACCCTGAAAACGAGTTC
AGAAGGCAGCTTATTGATCAGGTTGTCTCCACTGCTCTGTCTGAGAGCAAAAGCCCAGAA
CAAGTTTCTGCTGCTGTTAAAGCTTTCATGACTGCCGATCTTCCGCATGAACTGATTGAG
CTTCTTGAAAAGATTGTGCTCCAGAACTCTGCATTCAGTGGGAACTTTAATCTGCAAAAC
TTGCTTATCTTGACAGCCATTAAAGCTGACCCTTCAAGAGTTATGGACTATATCAACAGG
CTTGATAATTTTGATGGACCTGCAGTAGGGGAGGTAGCTGTAGAAGCCCAACTTTATGAA
GAAGCATTTGCAATCTTCAAGAAGTTCAATTTGAATGTCCAGGCTGCCAATGTTCTGCTA
GATAATATCCGCGATATAAATCGGGCTGTGGAGTTTGCCTTCCGAGTTGAAGAAGATGCT
GTTTGGAGCCAAGTGGCTAAAGCTCAGCTGAGAGAAGGATTAATCAGTGATGCTATTGAG
TCGTTTATTCGTGCAGATGATACCACCCAATTTTTGGATGTCATTCGTGCTGCAGAGGAT
GCAGATGTTTACCATGATTTGGTGAAGTATCTGCTGATGGTAAGGCAGAAGTCAAAAGAG
CCCAAGGTTGACAGTGAGCTAATCTATGCATATGCTAAAATAGATCGATTGAGCGACATT
GAAGAGTTCATTCTCATGCCAAATGTTGCTAATCTACCGAATGTTGGTGACCGGTTGTAT
GATGAAGCCTTATACGAGGCTGCAAAGATCATATTTGCTTTTATTTCTAACTGGGCCAAG
TTGGCTAGTACACTTGTGAAGCTATATCAGTTCCAAGGTGCTGTTGATGCAGCACGTAAA
GCAAATAGTGCAAAAACGTGGAAAGAAGTCTGCTTTGCTTGTGTTGACGCTGAAGAGTTC
CGCTTAGCTCAGATTTGTGGGCTTAACATTATCGTACAGGTGGATGATCTGGAGGAAGTG
AGTGAATATTAC

Peptide Sequence

PEP ID

XP_016479764.1

PEP Infomation

PREDICTED: clathrin heavy chain 1-like, partial [Nicotiana tabacum]

Sequence

MAAANAPITMKEALTLSSVGVNPQFITFTNVTMESDKYICVRETAPQNSVVIVDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVPGTTQDHLQIFNIDAKQKMKSHQMPEQVVFWKWI
TPKILGIVTQTSVYHWPIEGDTEPVKMFDRTANLANNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQSLEAHAASFASFRVPGSDRDSILISFATRSLNAGQVVS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIFVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTAEASSVGGFYAVNRRGQVLLATVNETTIIPFISGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
PGQTPPLLQYFGTLLTKGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEDLGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLVINIKGNLQIIVQVAKEYWEQLRVDACIKLFEQFK
SYDGLYFFLGSYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGNCDDELINVTNKNSLFKLQARY
VVERMDADLWEKVLNPENEFRRQLIDQVVSTALSESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAANVLLDNIRDINRAVEFAFRVEEDAVWSQVAKAQLREGLISDAIE
SFIRADDTTQFLDVIRAAEDADVYHDLVKYLLMVRQKSKEPKVDSELIYAYAKIDRLSDI
EEFILMPNVANLPNVGDRLYDEALYEAAKIIFAFISNWAKLASTLVKLYQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYY

Transcript Sequence

Gene sequence data has not been registered.